Difference between revisions of "TSS:Hg 101412.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=49333 |entrez_id=100500918 |gc_percent=0.402985 |gene_alias=mir-3651 |gene_description=microRNA 3651 |gene_name=MIR3651 |gene_t...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:5330 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-13 | ||
|distance_to_tss=49333 | |distance_to_tss=49333 | ||
| + | |end=92243215 | ||
| + | |end_of_center_position=92243215 | ||
|entrez_id=100500918 | |entrez_id=100500918 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=mir-3651 | |gene_alias=mir-3651 | ||
|gene_description=microRNA 3651 | |gene_description=microRNA 3651 | ||
| − | |gene_name= | + | |gene_id=3376 |
| + | |gene_name=isoleucyl-tRNA synthetase 1 | ||
| + | |gene_source=HGNC:5330 | ||
| + | |gene_symbol=IARS1 | ||
| + | |gene_synonyms=ILRS | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:5330 | ||
|nearest_ensembl=ENSG00000281156 | |nearest_ensembl=ENSG00000281156 | ||
|nearest_promoter_id=NR_037424 | |nearest_promoter_id=NR_037424 | ||
|nearest_refseq=NR_037424 | |nearest_refseq=NR_037424 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=3376 | ||
| + | |species=human | ||
| + | |start=92243213 | ||
| + | |start_of_center_position=92243214 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000474340.1 AK057920 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101412.1 | |tss_id=hg_101412.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92243214 |
|---|---|
| End of the center position in the TSS region: | 92243215 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000474340.1 AK057920 |
|---|---|
| Distance: | -13 |
| Num_trans: | 3376 |
| All_trans: | HGNC:5330 |
TATA-Box annotation
| Distance to TSS: | 49333 |
|---|---|
| Nearest PromoterID: | NR_037424 |
| Entrez ID: | 100500918 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037424 |
| Nearest Ensembl: | ENSG00000281156 |
| Gene Name: | isoleucyl-tRNA synthetase 1 |
| Gene Alias: | mir-3651 |
| Gene Description: | microRNA 3651 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
