Difference between revisions of "TSS:Hg 101508.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:955 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance_to_tss=- | + | |distance=26 |
| + | |distance_to_tss=-47 | ||
| + | |end=93955407 | ||
| + | |end_of_center_position=93955402 | ||
|entrez_id=56033 | |entrez_id=56033 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=BARX homeobox 1 | |gene_description=BARX homeobox 1 | ||
| − | |gene_name=BARX1 | + | |gene_id=56033 |
| + | |gene_name=BARX homeobox 1 | ||
| + | |gene_source=HGNC:955 | ||
| + | |gene_symbol=BARX1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:955 | ||
|nearest_ensembl=ENSG00000131668 | |nearest_ensembl=ENSG00000131668 | ||
|nearest_promoter_id=NM_021570 | |nearest_promoter_id=NM_021570 | ||
|nearest_refseq=NM_021570 | |nearest_refseq=NM_021570 | ||
|nearest_unigene=Hs.164960 | |nearest_unigene=Hs.164960 | ||
| + | |num_trans=56033 | ||
| + | |species=human | ||
| + | |start=93955396 | ||
| + | |start_of_center_position=93955401 | ||
| + | |strand=- | ||
| + | |transcript_name=BC064363 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101508.1 | |tss_id=hg_101508.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:06, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93955401 |
|---|---|
| End of the center position in the TSS region: | 93955402 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC064363 |
|---|---|
| Distance: | 26 |
| Num_trans: | 56033 |
| All_trans: | HGNC:955 |
TATA-Box annotation
| Distance to TSS: | -47 |
|---|---|
| Nearest PromoterID: | NM_021570 |
| Entrez ID: | 56033 |
| Nearest Unigene: | Hs.164960 |
| Nearest Refseq: | NM_021570 |
| Nearest Ensembl: | ENSG00000131668 |
| Gene Name: | BARX homeobox 1 |
| Gene Alias: | - |
| Gene Description: | BARX homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
