Difference between revisions of "TSS:Hg 101560.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9585 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038982 | |nearest_refseq=NR_038982 | ||
|nearest_unigene=Hs.661847 | |nearest_unigene=Hs.661847 | ||
| − | |num_trans= | + | |num_trans=5727 |
|species=human | |species=human | ||
|start=95469071 | |start=95469071 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000549678.1 | |transcript_name=ENST00000549678.1 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_101560.1 | |tss_id=hg_101560.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:07, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 95469081 |
|---|---|
| End of the center position in the TSS region: | 95469082 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000549678.1 |
|---|---|
| Distance: | -97 |
| Num_trans: | 5727 |
| All_trans: | HGNC:9585 |
TATA-Box annotation
| Distance to TSS: | 5473 |
|---|---|
| Nearest PromoterID: | NR_038982 |
| Entrez ID: | 100507346 |
| Nearest Unigene: | Hs.661847 |
| Nearest Refseq: | NR_038982 |
| Nearest Ensembl: | |
| Gene Name: | patched 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100507346 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
