Difference between revisions of "TSS:Hg 101585.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|RAD26L= | |RAD26L= | ||
|SR278= | |SR278= | ||
| − | |all_trans= | + | |all_trans=HGNC:27858 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-121 |
|end=95875593 | |end=95875593 | ||
|end_of_center_position=95875570 | |end_of_center_position=95875570 | ||
|entrez_id=375748 | |entrez_id=375748 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=BMFS2 | + | |gene_alias=BMFS2{{!}}C9orf102{{!}}RAD26L{{!}}SR278 |
|gene_description=ERCC excision repair 6 like 2 | |gene_description=ERCC excision repair 6 like 2 | ||
|gene_id=100128782 | |gene_id=100128782 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:27858 | |hgnc_mgi_id=HGNC:27858 | ||
|nearest_ensembl=ENSG00000182150 | |nearest_ensembl=ENSG00000182150 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020207 |
|nearest_refseq=NM_020207 | |nearest_refseq=NM_020207 | ||
|nearest_unigene=Hs.432364 | |nearest_unigene=Hs.432364 | ||
| − | |num_trans= | + | |num_trans=100128782 |
|species=human | |species=human | ||
|start=95875546 | |start=95875546 | ||
|start_of_center_position=95875569 | |start_of_center_position=95875569 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000429781.1 | + | |transcript_name=ENST00000660143.1 ENST00000429781.1 ENST00000657579.1 ENST00000670189.1 AK092137 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101585.1 | |tss_id=hg_101585.1 | ||
Latest revision as of 18:08, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 95875569 |
|---|---|
| End of the center position in the TSS region: | 95875570 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000660143.1 ENST00000429781.1 ENST00000657579.1 ENST00000670189.1 AK092137 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100128782 |
| All_trans: | HGNC:27858 |
TATA-Box annotation
| Distance to TSS: | -121 |
|---|---|
| Nearest PromoterID: | NM_020207 |
| Entrez ID: | 375748 |
| Nearest Unigene: | Hs.432364 |
| Nearest Refseq: | NM_020207 |
| Nearest Ensembl: | ENSG00000182150 |
| Gene Name: | long intergenic non-protein coding RNA 476 |
| Gene Alias: | BMFS2|C9orf102|RAD26L|SR278 |
| Gene Description: | ERCC excision repair 6 like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
