Difference between revisions of "TSS:Hg 101627.1"
From referenceTSS
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|NCBP= | |NCBP= | ||
|Sto1= | |Sto1= | ||
| − | |all_trans= | + | |all_trans=HGNC:30087 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=97633332 | |end=97633332 | ||
|end_of_center_position=97633321 | |end_of_center_position=97633321 | ||
| − | |entrez_id= | + | |entrez_id=158427 |
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias= | + | |gene_alias=C9orf97 |
| − | |gene_description= | + | |gene_description=thiosulfate sulfurtransferase like domain containing 2 |
|gene_id=158427 | |gene_id=158427 | ||
| − | |gene_name=thiosulfate sulfurtransferase | + | |gene_name=thiosulfate sulfurtransferase like domain containing 2 |
|gene_source=HGNC:30087 | |gene_source=HGNC:30087 | ||
|gene_symbol=TSTD2 | |gene_symbol=TSTD2 | ||
| Line 20: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30087 | |hgnc_mgi_id=HGNC:30087 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000136925 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_139246 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_139246 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.723236 |
| − | |num_trans= | + | |num_trans=158427 |
|species=human | |species=human | ||
|start=97633308 | |start=97633308 | ||
|start_of_center_position=97633320 | |start_of_center_position=97633320 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-37(GCTTTTCTACCC,+,0.00) |
|transcript_name=BX538308 BC035604 BX648493 | |transcript_name=BX538308 BC035604 BX648493 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 18:09, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97633320 |
|---|---|
| End of the center position in the TSS region: | 97633321 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX538308 BC035604 BX648493 |
|---|---|
| Distance: | 0 |
| Num_trans: | 158427 |
| All_trans: | HGNC:30087 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_139246 |
| Entrez ID: | 158427 |
| Nearest Unigene: | Hs.723236 |
| Nearest Refseq: | NM_139246 |
| Nearest Ensembl: | ENSG00000136925 |
| Gene Name: | thiosulfate sulfurtransferase like domain containing 2 |
| Gene Alias: | C9orf97 |
| Gene Description: | thiosulfate sulfurtransferase like domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -37(GCTTTTCTACCC,+,0.00) |
