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Difference between revisions of "TSS:Hg 101631.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|XPAC=
 
|XPAC=
|all_trans=BC014965:3 ENST00000375128.5:20 NM_000380:20 NM_001354975:-28 NR_027302:-28 NR_149094:-28 NR_149093:-28 NR_149092:-28 NR_149091:-28 LF383868:-28 MA619445:-28 D14533:42 ENST00000496104.1:65 ENST00000462523.5:67 KJ892389:68 BT019518:68 DQ893624:68 DQ895423:68 AB590398:68 KC899693:68
+
|all_trans=HGNC:12814
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 23: Line 23:
 
|nearest_refseq=NM_000380
 
|nearest_refseq=NM_000380
 
|nearest_unigene=Hs.654364
 
|nearest_unigene=Hs.654364
|num_trans=20
+
|num_trans=7507
 
|species=human
 
|species=human
 
|start=97697359
 
|start=97697359

Latest revision as of 18:09, 19 July 2021

Basic information about the TSS


TSS ID:hg_101631.1
Species:human
Chr:chr9
TSS Classification:yes
Start:97697359
End:97697381
Strand:-
TSS Score:1
Start of the center position in the TSS region:97697370
End of the center position in the TSS region:97697371



Gene and protein annotation


Transcript_name:BC014965
Distance:3
GeneID:7507
HGNC/MGI_ID:HGNC:12814
UniProt_ID:
Gene_name:XPA, DNA damage recognition and repair factor
Gene_symbol:XPA
Gene_synonyms:XP1 XPAC
Gene_source:HGNC:12814



Transcript annotation


Transcript_name:BC014965
Distance:3
Num_trans:7507
All_trans:HGNC:12814



TATA-Box annotation


Distance to TSS:39
Nearest PromoterID:NR_027302
Entrez ID:7507
Nearest Unigene:Hs.654364
Nearest Refseq:NM_000380
Nearest Ensembl:ENSG00000136936
Gene Name:XPA, DNA damage recognition and repair factor
Gene Alias:XP1|XPAC
Gene Description:XPA, DNA damage recognition and repair factor
Gene Type:protein-coding
CpG%:0.11
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):