Difference between revisions of "TSS:Hg 101639.1"
From referenceTSS
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| Line 7: | Line 7: | ||
|TTF-2= | |TTF-2= | ||
|TTF2= | |TTF2= | ||
| + | |all_trans=HGNC:44086 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=443 |
| − | |distance_to_tss= | + | |distance_to_tss=320 |
|end=97853570 | |end=97853570 | ||
| + | |end_of_center_position=97853547 | ||
|entrez_id=2304 | |entrez_id=2304 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=FKHL15 | + | |gene_alias=FKHL15{{!}}FOXE2{{!}}HFKH4{{!}}HFKL5{{!}}NMTC4{{!}}TITF2{{!}}TTF-2{{!}}TTF2 |
|gene_description=forkhead box E1 | |gene_description=forkhead box E1 | ||
| − | |gene_name= | + | |gene_id=101928337 |
| + | |gene_name=papillary thyroid carcinoma susceptibility candidate 2 | ||
| + | |gene_source=HGNC:44086 | ||
| + | |gene_symbol=PTCSC2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:44086 | ||
|nearest_ensembl=ENSG00000178919 | |nearest_ensembl=ENSG00000178919 | ||
|nearest_promoter_id=NM_004473 | |nearest_promoter_id=NM_004473 | ||
|nearest_refseq=NM_004473 | |nearest_refseq=NM_004473 | ||
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=101928337 |
|species=human | |species=human | ||
|start=97853522 | |start=97853522 | ||
| + | |start_of_center_position=97853546 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101639.1 | |tss_id=hg_101639.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:09, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97853546 |
|---|---|
| End of the center position in the TSS region: | 97853547 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000649461.1 ENST00000649526.1 ENST00000650104.1 |
|---|---|
| Distance: | 443 |
| Num_trans: | 101928337 |
| All_trans: | HGNC:44086 |
TATA-Box annotation
| Distance to TSS: | 320 |
|---|---|
| Nearest PromoterID: | NM_004473 |
| Entrez ID: | 2304 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_004473 |
| Nearest Ensembl: | ENSG00000178919 |
| Gene Name: | papillary thyroid carcinoma susceptibility candidate 2 |
| Gene Alias: | FKHL15|FOXE2|HFKH4|HFKL5|NMTC4|TITF2|TTF-2|TTF2 |
| Gene Description: | forkhead box E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
