Difference between revisions of "TSS:Hg 101670.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:16283 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=4 |
| − | |distance_to_tss= | + | |distance_to_tss=-104 |
|end=98119356 | |end=98119356 | ||
| + | |end_of_center_position=98119327 | ||
|entrez_id=9830 | |entrez_id=9830 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:16283 | |hgnc_mgi_id=HGNC:16283 | ||
|nearest_ensembl=ENSG00000106785 | |nearest_ensembl=ENSG00000106785 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014788 |
|nearest_refseq=NM_014788 | |nearest_refseq=NM_014788 | ||
|nearest_unigene=Hs.575631 | |nearest_unigene=Hs.575631 | ||
| − | |num_trans= | + | |num_trans=9830 |
|species=human | |species=human | ||
|start=98119296 | |start=98119296 | ||
| + | |start_of_center_position=98119326 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK055833 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101670.1 | |tss_id=hg_101670.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:10, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 98119326 |
|---|---|
| End of the center position in the TSS region: | 98119327 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK055833 |
|---|---|
| Distance: | 4 |
| Num_trans: | 9830 |
| All_trans: | HGNC:16283 |
TATA-Box annotation
| Distance to TSS: | -104 |
|---|---|
| Nearest PromoterID: | NM_014788 |
| Entrez ID: | 9830 |
| Nearest Unigene: | Hs.575631 |
| Nearest Refseq: | NM_014788 |
| Nearest Ensembl: | ENSG00000106785 |
| Gene Name: | tripartite motif containing 14 |
| Gene Alias: | - |
| Gene Description: | tripartite motif containing 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
