Difference between revisions of "TSS:Hg 101676.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|IR10= | |IR10= | ||
|WDR2= | |WDR2= | ||
| − | |all_trans= | + | |all_trans=HGNC:2255 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-13 |
|end=98192671 | |end=98192671 | ||
| + | |end_of_center_position=98192650 | ||
|entrez_id=7464 | |entrez_id=7464 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=CLIPINB | + | |gene_alias=CLIPINB{{!}}IR10{{!}}WDR2 |
|gene_description=coronin 2A | |gene_description=coronin 2A | ||
|gene_id=7464 | |gene_id=7464 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_003389 | |nearest_refseq=NM_003389 | ||
|nearest_unigene=Hs.113094 | |nearest_unigene=Hs.113094 | ||
| − | |num_trans= | + | |num_trans=7464 |
|species=human | |species=human | ||
|start=98192628 | |start=98192628 | ||
| + | |start_of_center_position=98192649 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375077. | + | |transcript_name=ENST00000375077.5 BC011690 AB209809 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101676.1 | |tss_id=hg_101676.1 | ||
Latest revision as of 18:10, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 98192649 |
|---|---|
| End of the center position in the TSS region: | 98192650 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375077.5 BC011690 AB209809 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7464 |
| All_trans: | HGNC:2255 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_052820 |
| Entrez ID: | 7464 |
| Nearest Unigene: | Hs.113094 |
| Nearest Refseq: | NM_003389 |
| Nearest Ensembl: | ENSG00000106789 |
| Gene Name: | coronin 2A |
| Gene Alias: | CLIPINB|IR10|WDR2 |
| Gene Description: | coronin 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
