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Difference between revisions of "TSS:Hg 101679.1"

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Line 2: Line 2:
 
|PARIS1=
 
|PARIS1=
 
|TBC1D2A=
 
|TBC1D2A=
|all_trans=AK298575:-25 CU687204:68 AK026105:142 AB209721:-154 AB449882:-174 ENST00000375064.5:-213 AF318370:-213 ENST00000342112.9:-223 AK131290:-232 BC071978:-263 ENST00000375066.6:-266 AY026527:-266 ENST00000465784.7:-282 NR_051978:-282 NM_001267571:-282 NM_018421:-282
+
|all_trans=HGNC:18026
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 24: Line 24:
 
|nearest_refseq=NM_018421
 
|nearest_refseq=NM_018421
 
|nearest_unigene=Hs.371016
 
|nearest_unigene=Hs.371016
|num_trans=16
+
|num_trans=55357
 
|species=human
 
|species=human
 
|start=98255352
 
|start=98255352

Latest revision as of 18:10, 19 July 2021

Basic information about the TSS


TSS ID:hg_101679.1
Species:human
Chr:chr9
TSS Classification:yes
Start:98255352
End:98255367
Strand:-
TSS Score:1
Start of the center position in the TSS region:98255359
End of the center position in the TSS region:98255360



Gene and protein annotation


Transcript_name:AK298575
Distance:-25
GeneID:55357
HGNC/MGI_ID:HGNC:18026
UniProt_ID:
Gene_name:TBC1 domain family member 2
Gene_symbol:TBC1D2
Gene_synonyms:Armus PARIS1 TBC1D2A
Gene_source:HGNC:18026



Transcript annotation


Transcript_name:AK298575
Distance:-25
Num_trans:55357
All_trans:HGNC:18026



TATA-Box annotation


Distance to TSS:289
Nearest PromoterID:NR_051978
Entrez ID:55357
Nearest Unigene:Hs.371016
Nearest Refseq:NM_018421
Nearest Ensembl:ENSG00000095383
Gene Name:TBC1 domain family member 2
Gene Alias:PARIS-1|PARIS1|TBC1D2A
Gene Description:TBC1 domain family member 2
Gene Type:protein-coding
CpG%:0.08
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):