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Difference between revisions of "TSS:Hg 101762.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000374847.5:-1 AK313981:-16 ENST00000374848.8:-57 NM_001303107:-57 NM_032342:-57 BC006115:-77 NM_001303108:268
+
|all_trans=HGNC:28180
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 22: Line 22:
 
|nearest_refseq=NM_032342
 
|nearest_refseq=NM_032342
 
|nearest_unigene=Hs.388742
 
|nearest_unigene=Hs.388742
|num_trans=7
+
|num_trans=84302
 
|species=human
 
|species=human
 
|start=101487037
 
|start=101487037

Latest revision as of 18:12, 19 July 2021

Basic information about the TSS


TSS ID:hg_101762.1
Species:human
Chr:chr9
TSS Classification:yes
Start:101487037
End:101487116
Strand:-
TSS Score:1
Start of the center position in the TSS region:101487076
End of the center position in the TSS region:101487077



Gene and protein annotation


Transcript_name:ENST00000374847.5
Distance:-1
GeneID:84302
HGNC/MGI_ID:HGNC:28180
UniProt_ID:A0A024R188
Gene_name:post-GPI attachment to proteins GalNAc transferase 4
Gene_symbol:PGAP4
Gene_synonyms:MGC12992
Gene_source:HGNC:28180



Transcript annotation


Transcript_name:ENST00000374847.5
Distance:-1
Num_trans:84302
All_trans:HGNC:28180



TATA-Box annotation


Distance to TSS:96
Nearest PromoterID:NM_032342
Entrez ID:84302
Nearest Unigene:Hs.388742
Nearest Refseq:NM_032342
Nearest Ensembl:ENSG00000165152
Gene Name:post-GPI attachment to proteins GalNAc transferase 4
Gene Alias:C9orf125
Gene Description:transmembrane protein 246
Gene Type:protein-coding
CpG%:0.115
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):