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Difference between revisions of "TSS:Hg 101798.1"

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Line 4: Line 4:
 
|HDLDT1=
 
|HDLDT1=
 
|TGD=
 
|TGD=
|all_trans=AB037924:2 AB055982:89 AB445477:89
+
|all_trans=HGNC:29
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.025
 
|cpg_percent=0.025
 
|distance=2
 
|distance=2
|distance_to_tss=24472
+
|distance_to_tss=24381
 
|end=104903780
 
|end=104903780
 
|end_of_center_position=104903774
 
|end_of_center_position=104903774
 
|entrez_id=19
 
|entrez_id=19
 
|gc_percent=0.577114
 
|gc_percent=0.577114
|gene_alias=ABC-1
+
|gene_alias=ABC-1{{!}}ABC1{{!}}CERP{{!}}HDLDT1{{!}}TGD
 
|gene_description=ATP binding cassette subfamily A member 1
 
|gene_description=ATP binding cassette subfamily A member 1
 
|gene_id=19
 
|gene_id=19
Line 26: Line 26:
 
|nearest_refseq=NM_005502
 
|nearest_refseq=NM_005502
 
|nearest_unigene=Hs.659274
 
|nearest_unigene=Hs.659274
|num_trans=3
+
|num_trans=19
 
|species=human
 
|species=human
 
|start=104903767
 
|start=104903767

Latest revision as of 18:13, 19 July 2021

Basic information about the TSS


TSS ID:hg_101798.1
Species:human
Chr:chr9
TSS Classification:no
Start:104903767
End:104903780
Strand:-
TSS Score:1
Start of the center position in the TSS region:104903773
End of the center position in the TSS region:104903774



Gene and protein annotation


Transcript_name:AB037924
Distance:2
GeneID:19
HGNC/MGI_ID:HGNC:29
UniProt_ID:Q9NS76
Gene_name:ATP binding cassette subfamily A member 1
Gene_symbol:ABCA1
Gene_synonyms:TGD
Gene_source:HGNC:29



Transcript annotation


Transcript_name:AB037924
Distance:2
Num_trans:19
All_trans:HGNC:29



TATA-Box annotation


Distance to TSS:24381
Nearest PromoterID:NM_005502
Entrez ID:19
Nearest Unigene:Hs.659274
Nearest Refseq:NM_005502
Nearest Ensembl:ENSG00000165029
Gene Name:ATP binding cassette subfamily A member 1
Gene Alias:ABC-1|ABC1|CERP|HDLDT1|TGD
Gene Description:ATP binding cassette subfamily A member 1
Gene Type:protein-coding
CpG%:0.025
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):