Difference between revisions of "TSS:Hg 101872.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CLLP= | ||
| + | |all_trans=HGNC:2512 | ||
| + | |alpha-CATU= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance_to_tss= | + | |distance=3 |
| + | |distance_to_tss=28 | ||
| + | |end=109013477 | ||
| + | |end_of_center_position=109013472 | ||
|entrez_id=8727 | |entrez_id=8727 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=ACRP | + | |gene_alias=ACRP{{!}}CLLP{{!}}alpha-CATU |
|gene_description=catenin alpha like 1 | |gene_description=catenin alpha like 1 | ||
| − | |gene_name=CTNNAL1 | + | |gene_id=8727 |
| + | |gene_name=catenin alpha like 1 | ||
| + | |gene_source=HGNC:2512 | ||
| + | |gene_symbol=CTNNAL1 | ||
| + | |gene_synonyms=CLLP alpha-CATU | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2512 | ||
|nearest_ensembl=ENSG00000119326 | |nearest_ensembl=ENSG00000119326 | ||
|nearest_promoter_id=NM_001286974 | |nearest_promoter_id=NM_001286974 | ||
|nearest_refseq=NM_003798 | |nearest_refseq=NM_003798 | ||
|nearest_unigene=Hs.58488 | |nearest_unigene=Hs.58488 | ||
| + | |num_trans=8727 | ||
| + | |species=human | ||
| + | |start=109013465 | ||
| + | |start_of_center_position=109013471 | ||
| + | |strand=- | ||
| + | |transcript_name=BC117208 BC117234 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101872.1 | |tss_id=hg_101872.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:14, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 109013471 |
|---|---|
| End of the center position in the TSS region: | 109013472 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC117208 BC117234 |
|---|---|
| Distance: | 3 |
| Num_trans: | 8727 |
| All_trans: | HGNC:2512 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_001286974 |
| Entrez ID: | 8727 |
| Nearest Unigene: | Hs.58488 |
| Nearest Refseq: | NM_003798 |
| Nearest Ensembl: | ENSG00000119326 |
| Gene Name: | catenin alpha like 1 |
| Gene Alias: | ACRP|CLLP|alpha-CATU |
| Gene Description: | catenin alpha like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
