Personal tools

Difference between revisions of "TSS:Hg 101933.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|SEL-OB=
 
|SEL-OB=
 
|SELOB=
 
|SELOB=
|all_trans=AJ619977:-87 AY243503:-87 ENST00000374469.6:-122 NM_153366:-122 AK122605:-257 ENST00000401783.6:-261 ENST00000374461.1:-261 BC030816:-261
+
|all_trans=HGNC:15985
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 26: Line 26:
 
|nearest_refseq=NM_153366
 
|nearest_refseq=NM_153366
 
|nearest_unigene=Hs.522334
 
|nearest_unigene=Hs.522334
|num_trans=8
+
|num_trans=79987
 
|species=human
 
|species=human
 
|start=110579556
 
|start=110579556

Latest revision as of 18:16, 19 July 2021

Basic information about the TSS


TSS ID:hg_101933.1
Species:human
Chr:chr9
TSS Classification:yes
Start:110579556
End:110579619
Strand:-
TSS Score:1
Start of the center position in the TSS region:110579587
End of the center position in the TSS region:110579588



Gene and protein annotation


Transcript_name:AJ619977 AY243503
Distance:-87
GeneID:79987
HGNC/MGI_ID:HGNC:15985
UniProt_ID:Q5JB40
Gene_name:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene_symbol:SVEP1
Gene_synonyms:FLJ13529 POLYDOM bA427L11.3
Gene_source:HGNC:15985



Transcript annotation


Transcript_name:AJ619977 AY243503
Distance:-87
Num_trans:79987
All_trans:HGNC:15985



TATA-Box annotation


Distance to TSS:153
Nearest PromoterID:NM_153366
Entrez ID:79987
Nearest Unigene:Hs.522334
Nearest Refseq:NM_153366
Nearest Ensembl:ENSG00000165124
Gene Name:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene Alias:C9orf13|CCP22|POLYDOM|SEL-OB|SELOB
Gene Description:sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):