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Difference between revisions of "TSS:Hg 101965.1"

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Line 5: Line 5:
 
|Mrec1.3=
 
|Mrec1.3=
 
|VZG1=
 
|VZG1=
|all_trans=ENST00000374431.7:-22 BC036034:-22 AK299279:45 ENST00000358883.8:-64 AK022808:-64 NM_001401:-66 NM_057159:-66 NM_001351418:-66 NM_001351417:-66 NM_001351416:-66 NM_001351415:-66 NM_001351419:380 ENST00000441240.1:-437 NM_001351414:-449 NM_001351413:-449 NM_001351412:-449 NM_001351411:-449 NM_001351410:-449 NM_001351409:-449 NM_001351408:-449 NM_001351407:-449 NM_001351406:-449
+
|all_trans=HGNC:3166
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 28: Line 28:
 
|nearest_refseq=NM_001401
 
|nearest_refseq=NM_001401
 
|nearest_unigene=Hs.126667
 
|nearest_unigene=Hs.126667
|num_trans=22
+
|num_trans=1902
 
|rec.1.3=
 
|rec.1.3=
 
|species=human
 
|species=human

Latest revision as of 18:16, 19 July 2021

Basic information about the TSS


TSS ID:hg_101965.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111038008
End:111038021
Strand:-
TSS Score:1
Start of the center position in the TSS region:111038014
End of the center position in the TSS region:111038015



Gene and protein annotation


Transcript_name:ENST00000374431.7 BC036034
Distance:-22
GeneID:1902
HGNC/MGI_ID:HGNC:3166
UniProt_ID:Q5VZX0
Gene_name:lysophosphatidic acid receptor 1
Gene_symbol:LPAR1
Gene_synonyms:Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
Gene_source:HGNC:3166



Transcript annotation


Transcript_name:ENST00000374431.7 BC036034
Distance:-22
Num_trans:1902
All_trans:HGNC:3166



TATA-Box annotation


Distance to TSS:72
Nearest PromoterID:NM_057159
Entrez ID:1902
Nearest Unigene:Hs.126667
Nearest Refseq:NM_001401
Nearest Ensembl:ENSG00000198121
Gene Name:lysophosphatidic acid receptor 1
Gene Alias:EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1
Gene Description:lysophosphatidic acid receptor 1
Gene Type:protein-coding
CpG%:0.14
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):