Difference between revisions of "TSS:Hg 10198.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|GLUT5= | |GLUT5= | ||
| − | |all_trans=ENST00000474145.5 | + | |all_trans=NM_001328619:-38 ENST00000474145.5:-44 ENST00000484798.5:490 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance=- | + | |distance=-38 |
| − | |distance_to_tss= | + | |distance_to_tss=40 |
|end=9072221 | |end=9072221 | ||
| + | |end_of_center_position=9072219 | ||
|entrez_id=6518 | |entrez_id=6518 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=GLUT-5 | + | |gene_alias=GLUT-5{{!}}GLUT5 |
|gene_description=solute carrier family 2 member 5 | |gene_description=solute carrier family 2 member 5 | ||
|gene_id=6518 | |gene_id=6518 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_003039 | |nearest_refseq=NM_003039 | ||
|nearest_unigene=Hs.530003 | |nearest_unigene=Hs.530003 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=9072216 | |start=9072216 | ||
| + | |start_of_center_position=9072218 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001328619.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10198.1 | |tss_id=hg_10198.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P22732 |
}} | }} | ||
Latest revision as of 18:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9072218 |
|---|---|
| End of the center position in the TSS region: | 9072219 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001328619.2 |
|---|---|
| Distance: | -38 |
| Num_trans: | 3 |
| All_trans: | NM_001328619:-38 ENST00000474145.5:-44 ENST00000484798.5:490 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001328619 |
| Entrez ID: | 6518 |
| Nearest Unigene: | Hs.530003 |
| Nearest Refseq: | NM_003039 |
| Nearest Ensembl: | ENSG00000142583 |
| Gene Name: | solute carrier family 2 member 5 |
| Gene Alias: | GLUT-5|GLUT5 |
| Gene Description: | solute carrier family 2 member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
