Difference between revisions of "TSS:Hg 102.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-93 |
|distance_to_tss=-162 | |distance_to_tss=-162 | ||
|end=1425969 | |end=1425969 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=1425966 | |start_of_center_position=1425966 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001146685.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102.1 | |tss_id=hg_102.1 | ||
Latest revision as of 18:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1425966 |
|---|---|
| End of the center position in the TSS region: | 1425967 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001146685.2 |
|---|---|
| Distance: | -93 |
| Num_trans: | 6 |
| All_trans: | ENST00000378821.3:159 NM_001146685:159 LF383938:159 MA619515:159 LF357554:410 MA593131:410 |
TATA-Box annotation
| Distance to TSS: | -162 |
|---|---|
| Nearest PromoterID: | NM_001146685 |
| Entrez ID: | 643965 |
| Nearest Unigene: | Hs.729765 |
| Nearest Refseq: | NM_001146685 |
| Nearest Ensembl: | ENSG00000205116 |
| Gene Name: | transmembrane protein 88B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 88B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
