Difference between revisions of "TSS:Hg 102.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378821.3:159 NM_001146685:159 | + | |all_trans=ENST00000378821.3:159 NM_001146685:159 LF383938:159 MA619515:159 LF357554:410 MA593131:410 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-93 |
|distance_to_tss=-162 | |distance_to_tss=-162 | ||
|end=1425969 | |end=1425969 | ||
| + | |end_of_center_position=1425967 | ||
|entrez_id=643965 | |entrez_id=643965 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001146685 | |nearest_refseq=NM_001146685 | ||
|nearest_unigene=Hs.729765 | |nearest_unigene=Hs.729765 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=1425963 | |start=1425963 | ||
| + | |start_of_center_position=1425966 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001146685.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102.1 | |tss_id=hg_102.1 | ||
Latest revision as of 18:17, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1425966 |
|---|---|
| End of the center position in the TSS region: | 1425967 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001146685.2 |
|---|---|
| Distance: | -93 |
| Num_trans: | 6 |
| All_trans: | ENST00000378821.3:159 NM_001146685:159 LF383938:159 MA619515:159 LF357554:410 MA593131:410 |
TATA-Box annotation
| Distance to TSS: | -162 |
|---|---|
| Nearest PromoterID: | NM_001146685 |
| Entrez ID: | 643965 |
| Nearest Unigene: | Hs.729765 |
| Nearest Refseq: | NM_001146685 |
| Nearest Ensembl: | ENSG00000205116 |
| Gene Name: | transmembrane protein 88B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 88B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
