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Difference between revisions of "TSS:Hg 102008.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK122712:-141 ENST00000602447.5:163 ENST00000602978.1:-171 NM_001364930:280 NM_001364931:280 AK308313:280 LF354975:-468 MA590552:-468 ENST00000338205.9:-471 NM_001364929:-497 NM_001363756:-497
+
|all_trans=HGNC:29020
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.175
 
|cpg_percent=0.175
Line 22: Line 22:
 
|nearest_refseq=NM_001080398
 
|nearest_refseq=NM_001080398
 
|nearest_unigene=Hs.368255
 
|nearest_unigene=Hs.368255
|num_trans=11
+
|num_trans=23392
 
|species=human
 
|species=human
 
|start=111483841
 
|start=111483841

Latest revision as of 18:17, 19 July 2021

Basic information about the TSS


TSS ID:hg_102008.1
Species:human
Chr:chr9
TSS Classification:no
Start:111483841
End:111483886
Strand:-
TSS Score:1
Start of the center position in the TSS region:111483863
End of the center position in the TSS region:111483864



Gene and protein annotation


Transcript_name:AK122712
Distance:-141
GeneID:23392
HGNC/MGI_ID:HGNC:29020
UniProt_ID:B3KV72
Gene_name:Ecm29 proteasome adaptor and scaffold
Gene_symbol:ECPAS
Gene_synonyms:ECM29 FLJ22036
Gene_source:HGNC:29020



Transcript annotation


Transcript_name:AK122712
Distance:-141
Num_trans:23392
All_trans:HGNC:29020



TATA-Box annotation


Distance to TSS:-302
Nearest PromoterID:NM_001364931
Entrez ID:23392
Nearest Unigene:Hs.368255
Nearest Refseq:NM_001080398
Nearest Ensembl:ENSG00000136813
Gene Name:Ecm29 proteasome adaptor and scaffold
Gene Alias:ECM29|KIAA0368
Gene Description:Ecm29 proteasome adaptor and scaffold
Gene Type:protein-coding
CpG%:0.175
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):