Difference between revisions of "TSS:Hg 102017.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=333 |entrez_id=23392 |gc_percent=0.706468 |gene_alias=ECM29 |gene_description=KIAA0368 |gene_name=KIAA0368 |gene_type=protein-co...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001364929:15 NM_001363756:15 ENST00000338205.9:41 LF354975:44 MA590552:44 ENST00000259335.8:-318 LF383872:-318 MA619449:-318 BC172431:-319 ENST00000602978.1:341 AK122712:371 LF211951:-474 MA447528:-474 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance_to_tss= | + | |distance=15 |
| + | |distance_to_tss=-29 | ||
| + | |end=111484427 | ||
| + | |end_of_center_position=111484413 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
| − | |gene_name= | + | |gene_id=23392 |
| + | |gene_name=Ecm29 proteasome adaptor and scaffold | ||
| + | |gene_source=HGNC:29020 | ||
| + | |gene_symbol=ECPAS | ||
| + | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364929 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=111484397 | ||
| + | |start_of_center_position=111484412 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001364929.1 NM_001363756.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102017.1 | |tss_id=hg_102017.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:18, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111484412 |
|---|---|
| End of the center position in the TSS region: | 111484413 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001364929.1 NM_001363756.2 |
|---|---|
| Distance: | 15 |
| Num_trans: | 13 |
| All_trans: | NM_001364929:15 NM_001363756:15 ENST00000338205.9:41 LF354975:44 MA590552:44 ENST00000259335.8:-318 LF383872:-318 MA619449:-318 BC172431:-319 ENST00000602978.1:341 AK122712:371 LF211951:-474 MA447528:-474 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_001364929 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | Ecm29 proteasome adaptor and scaffold |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
