Difference between revisions of "TSS:Hg 102023.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|PGR1= | |PGR1= | ||
|ZADH3= | |ZADH3= | ||
| − | |all_trans= | + | |all_trans=HGNC:18429 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 11: | Line 11: | ||
|entrez_id=22949 | |entrez_id=22949 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=LTB4DH | + | |gene_alias=LTB4DH{{!}}PGR1{{!}}ZADH3 |
|gene_description=prostaglandin reductase 1 | |gene_description=prostaglandin reductase 1 | ||
|gene_id=22949 | |gene_id=22949 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:18429 | |hgnc_mgi_id=HGNC:18429 | ||
|nearest_ensembl=ENSG00000106853 | |nearest_ensembl=ENSG00000106853 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001146109 |
|nearest_refseq=NM_012212 | |nearest_refseq=NM_012212 | ||
|nearest_unigene=Hs.584864 | |nearest_unigene=Hs.584864 | ||
| − | |num_trans= | + | |num_trans=22949 |
|species=human | |species=human | ||
|start=111599813 | |start=111599813 | ||
|start_of_center_position=111599835 | |start_of_center_position=111599835 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000538962. | + | |transcript_name=ENST00000538962.7 ENST00000374313.5 AK298379 AK289597 AK309866 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102023.1 | |tss_id=hg_102023.1 | ||
Latest revision as of 18:18, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111599835 |
|---|---|
| End of the center position in the TSS region: | 111599836 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000538962.7 ENST00000374313.5 AK298379 AK289597 AK309866 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22949 |
| All_trans: | HGNC:18429 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_001146109 |
| Entrez ID: | 22949 |
| Nearest Unigene: | Hs.584864 |
| Nearest Refseq: | NM_012212 |
| Nearest Ensembl: | ENSG00000106853 |
| Gene Name: | prostaglandin reductase 1 |
| Gene Alias: | LTB4DH|PGR1|ZADH3 |
| Gene Description: | prostaglandin reductase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
