Difference between revisions of "TSS:Hg 102073.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000457681 | + | |all_trans=NM_001350649:0 ENST00000457681.1:430 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=112487650 | |end=112487650 | ||
|end_of_center_position=112487642 | |end_of_center_position=112487642 | ||
| − | |entrez_id= | + | |entrez_id=100133204 |
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=chromosome 9 open reading frame 147 |
| − | |gene_id= | + | |gene_id=100133204 |
| − | |gene_name= | + | |gene_name=HSDL2 antisense RNA 1 |
|gene_source=HGNC:31438 | |gene_source=HGNC:31438 | ||
| − | |gene_symbol= | + | |gene_symbol=HSDL2-AS1 |
|gene_synonyms=bA32M23.3 | |gene_synonyms=bA32M23.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:31438 | |hgnc_mgi_id=HGNC:31438 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350649 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001350649 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.662552 |
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
| Line 27: | Line 27: | ||
|start_of_center_position=112487641 | |start_of_center_position=112487641 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001350649.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102073.1 | |tss_id=hg_102073.1 | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 112487641 |
|---|---|
| End of the center position in the TSS region: | 112487642 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001350649.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NM_001350649:0 ENST00000457681.1:430 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001350649 |
| Entrez ID: | 100133204 |
| Nearest Unigene: | Hs.662552 |
| Nearest Refseq: | NM_001350649 |
| Nearest Ensembl: | |
| Gene Name: | HSDL2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 147 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
