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Difference between revisions of "TSS:Hg 102076.1"

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{{TSSDetail
 
{{TSSDetail
 
|TSCOT=
 
|TSCOT=
|all_trans=ENST00000491462.2:-17 BC048285:17 AK314414:-25 ENST00000374228.5:-83 NM_033051:-83 AK055571:-86 HQ448607:100 KJ899379:100 CU690566:100 AF242557:-120
+
|all_trans=HGNC:16055
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 23: Line 23:
 
|nearest_refseq=NM_033051
 
|nearest_refseq=NM_033051
 
|nearest_unigene=Hs.512668
 
|nearest_unigene=Hs.512668
|num_trans=10
+
|num_trans=57864
 
|species=human
 
|species=human
 
|start=112890781
 
|start=112890781

Latest revision as of 18:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_102076.1
Species:human
Chr:chr9
TSS Classification:yes
Start:112890781
End:112890793
Strand:-
TSS Score:1
Start of the center position in the TSS region:112890787
End of the center position in the TSS region:112890788



Gene and protein annotation


Transcript_name:ENST00000491462.2
Distance:-17
GeneID:57864
HGNC/MGI_ID:HGNC:16055
UniProt_ID:S4R3Y2
Gene_name:solute carrier family 46 member 2
Gene_symbol:SLC46A2
Gene_synonyms:Ly110
Gene_source:HGNC:16055



Transcript annotation


Transcript_name:ENST00000491462.2
Distance:-17
Num_trans:57864
All_trans:HGNC:16055



TATA-Box annotation


Distance to TSS:89
Nearest PromoterID:NM_033051
Entrez ID:57864
Nearest Unigene:Hs.512668
Nearest Refseq:NM_033051
Nearest Ensembl:ENSG00000119457
Gene Name:solute carrier family 46 member 2
Gene Alias:Ly110|TSCOT
Gene Description:solute carrier family 46 member 2
Gene Type:protein-coding
CpG%:0.1
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):