Difference between revisions of "TSS:Hg 102079.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TSCOT= | |TSCOT= | ||
| − | |all_trans= | + | |all_trans=HGNC:16055 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-32 |
|end=112890919 | |end=112890919 | ||
| + | |end_of_center_position=112890908 | ||
|entrez_id=57864 | |entrez_id=57864 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=Ly110 | + | |gene_alias=Ly110{{!}}TSCOT |
|gene_description=solute carrier family 46 member 2 | |gene_description=solute carrier family 46 member 2 | ||
|gene_id=57864 | |gene_id=57864 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_033051 | |nearest_refseq=NM_033051 | ||
|nearest_unigene=Hs.512668 | |nearest_unigene=Hs.512668 | ||
| − | |num_trans= | + | |num_trans=57864 |
|species=human | |species=human | ||
|start=112890896 | |start=112890896 | ||
| + | |start_of_center_position=112890907 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-30(CCTTTTCTGGCC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=AF242557 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102079.1 | |tss_id=hg_102079.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 112890907 |
|---|---|
| End of the center position in the TSS region: | 112890908 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF242557 |
|---|---|
| Distance: | 0 |
| Num_trans: | 57864 |
| All_trans: | HGNC:16055 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_033051 |
| Entrez ID: | 57864 |
| Nearest Unigene: | Hs.512668 |
| Nearest Refseq: | NM_033051 |
| Nearest Ensembl: | ENSG00000119457 |
| Gene Name: | solute carrier family 46 member 2 |
| Gene Alias: | Ly110|TSCOT |
| Gene Description: | solute carrier family 46 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -30(CCTTTTCTGGCC,+,0.00) |
