Difference between revisions of "TSS:Hg 102095.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=180 |entrez_id=246184 |gc_percent=0.626866 |gene_alias=ANAPC12|APC12|C9orf17 |gene_description=cell division cycle 26 |gene_nam...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |APC12= | ||
| + | |C9orf17= | ||
| + | |all_trans=HGNC:23397 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance_to_tss= | + | |distance=-21 |
| + | |distance_to_tss=163 | ||
| + | |end=113275420 | ||
| + | |end_of_center_position=113275410 | ||
|entrez_id=246184 | |entrez_id=246184 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=ANAPC12 | + | |gene_alias=ANAPC12{{!}}APC12{{!}}C9orf17 |
|gene_description=cell division cycle 26 | |gene_description=cell division cycle 26 | ||
| − | |gene_name= | + | |gene_id=23307 |
| + | |gene_name=FKBP prolyl isomerase family member 15 | ||
| + | |gene_source=HGNC:23397 | ||
| + | |gene_symbol=FKBP15 | ||
| + | |gene_synonyms=FKBP133 PPP1R76 WAFL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23397 | ||
|nearest_ensembl=ENSG00000176386 | |nearest_ensembl=ENSG00000176386 | ||
|nearest_promoter_id=NM_139286 | |nearest_promoter_id=NM_139286 | ||
|nearest_refseq=NM_139286 | |nearest_refseq=NM_139286 | ||
|nearest_unigene=Hs.727648 | |nearest_unigene=Hs.727648 | ||
| − | |tata_box= | + | |num_trans=23307 |
| + | |species=human | ||
| + | |start=113275398 | ||
| + | |start_of_center_position=113275409 | ||
| + | |strand=- | ||
| + | |tata_box=15(GGCTTGAAAAGA,-,0.00) | ||
| + | |transcript_name=AK307507 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102095.1 | |tss_id=hg_102095.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113275409 |
|---|---|
| End of the center position in the TSS region: | 113275410 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK307507 |
|---|---|
| Distance: | -21 |
| Num_trans: | 23307 |
| All_trans: | HGNC:23397 |
TATA-Box annotation
| Distance to TSS: | 163 |
|---|---|
| Nearest PromoterID: | NM_139286 |
| Entrez ID: | 246184 |
| Nearest Unigene: | Hs.727648 |
| Nearest Refseq: | NM_139286 |
| Nearest Ensembl: | ENSG00000176386 |
| Gene Name: | FKBP prolyl isomerase family member 15 |
| Gene Alias: | ANAPC12|APC12|C9orf17 |
| Gene Description: | cell division cycle 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 15(GGCTTGAAAAGA,-,0.00) |
