Difference between revisions of "TSS:Hg 102102.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|C9orf158= | |C9orf158= | ||
| − | |all_trans= | + | |all_trans=NM_001371923:0 NM_001304511:0 NM_001304509:0 NM_001304510:0 ENST00000374180.3:-3 AK315401:23 ENST00000485934.1:51 NM_031219:376 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=113376996 | |end=113376996 | ||
|end_of_center_position=113376986 | |end_of_center_position=113376986 | ||
|entrez_id=81932 | |entrez_id=81932 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=2810435D12Rik | + | |gene_alias=2810435D12Rik{{!}}C9orf158 |
|gene_description=haloacid dehalogenase like hydrolase domain containing 3 | |gene_description=haloacid dehalogenase like hydrolase domain containing 3 | ||
|gene_id=81932 | |gene_id=81932 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:28171 | |hgnc_mgi_id=HGNC:28171 | ||
|nearest_ensembl=ENSG00000119431 | |nearest_ensembl=ENSG00000119431 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001304509 |
|nearest_refseq=NM_031219 | |nearest_refseq=NM_031219 | ||
|nearest_unigene=Hs.7739 | |nearest_unigene=Hs.7739 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=113376985 | |start_of_center_position=113376985 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001371923.1 NM_001304509.2 NM_001304510.2 NM_001304511.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102102.1 | |tss_id=hg_102102.1 | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 113376985 |
|---|---|
| End of the center position in the TSS region: | 113376986 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001371923.1 NM_001304509.2 NM_001304510.2 NM_001304511.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | NM_001371923:0 NM_001304511:0 NM_001304509:0 NM_001304510:0 ENST00000374180.3:-3 AK315401:23 ENST00000485934.1:51 NM_031219:376 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001304509 |
| Entrez ID: | 81932 |
| Nearest Unigene: | Hs.7739 |
| Nearest Refseq: | NM_031219 |
| Nearest Ensembl: | ENSG00000119431 |
| Gene Name: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Alias: | 2810435D12Rik|C9orf158 |
| Gene Description: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
