Difference between revisions of "TSS:Hg 102106.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PBGS= | |PBGS= | ||
| − | |all_trans= | + | |all_trans=HGNC:395 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=113401316 | |end=113401316 | ||
|end_of_center_position=113401283 | |end_of_center_position=113401283 | ||
|entrez_id=210 | |entrez_id=210 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=ALADH | + | |gene_alias=ALADH{{!}}PBGS |
|gene_description=aminolevulinate dehydratase | |gene_description=aminolevulinate dehydratase | ||
|gene_id=210 | |gene_id=210 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:395 | |hgnc_mgi_id=HGNC:395 | ||
|nearest_ensembl=ENSG00000148218 | |nearest_ensembl=ENSG00000148218 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000031 |
|nearest_refseq=NM_000031 | |nearest_refseq=NM_000031 | ||
|nearest_unigene=Hs.1227 | |nearest_unigene=Hs.1227 | ||
| − | |num_trans= | + | |num_trans=210 |
|species=human | |species=human | ||
|start=113401249 | |start=113401249 | ||
|start_of_center_position=113401282 | |start_of_center_position=113401282 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000468504.5 ENST00000464749.5 ENST00000448137.5 ENST00000494848 | + | |transcript_name=ENST00000409155.8 ENST00000468504.5 ENST00000464749.5 ENST00000448137.5 ENST00000494848.1 BC000977 AK131490 AK290490 AK312552 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102106.1 | |tss_id=hg_102106.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B7ZBK6 Q6ZMU0 | + | |uniprot_id=A0A140VJL9 B7ZBK6 Q6ZMU0 |
}} | }} | ||
Latest revision as of 18:19, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 113401282 |
|---|---|
| End of the center position in the TSS region: | 113401283 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000409155.8 ENST00000468504.5 ENST00000464749.5 ENST00000448137.5 ENST00000494848.1 BC000977 AK131490 AK290490 AK312552 |
|---|---|
| Distance: | 0 |
| Num_trans: | 210 |
| All_trans: | HGNC:395 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_000031 |
| Entrez ID: | 210 |
| Nearest Unigene: | Hs.1227 |
| Nearest Refseq: | NM_000031 |
| Nearest Ensembl: | ENSG00000148218 |
| Gene Name: | aminolevulinate dehydratase |
| Gene Alias: | ALADH|PBGS |
| Gene Description: | aminolevulinate dehydratase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
