Difference between revisions of "TSS:Hg 102108.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:13546 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=365 |
|end=113410315 | |end=113410315 | ||
| − | |entrez_id= | + | |end_of_center_position=113410310 |
| + | |entrez_id=54107 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias= | + | |gene_alias=CHARAC17{{!}}CHRAC17{{!}}CHRAC2{{!}}YBL1{{!}}p17 |
| − | |gene_description= | + | |gene_description=DNA polymerase epsilon 3, accessory subunit |
|gene_id=54107 | |gene_id=54107 | ||
| − | |gene_name= | + | |gene_name=DNA polymerase epsilon 3, accessory subunit |
|gene_source=HGNC:13546 | |gene_source=HGNC:13546 | ||
|gene_symbol=POLE3 | |gene_symbol=POLE3 | ||
| − | |gene_synonyms=CHARAC17 CHRAC17 Ybl1 p17 | + | |gene_synonyms=CHARAC17 CHRAC17 CHRAC2 Ybl1 p17 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13546 | |hgnc_mgi_id=HGNC:13546 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000148229 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_027261 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_017443 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.108112 |
| − | |num_trans= | + | |num_trans=54107 |
|species=human | |species=human | ||
|start=113410304 | |start=113410304 | ||
| + | |start_of_center_position=113410309 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AF226077 AY720898 JF432738 | + | |transcript_name=AF226077 AY720898 JF432738 AB527738 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102108.1 | |tss_id=hg_102108.1 | ||
Latest revision as of 18:20, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113410309 |
|---|---|
| End of the center position in the TSS region: | 113410310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF226077 AY720898 JF432738 AB527738 |
|---|---|
| Distance: | 12 |
| Num_trans: | 54107 |
| All_trans: | HGNC:13546 |
TATA-Box annotation
| Distance to TSS: | 365 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | DNA polymerase epsilon 3, accessory subunit |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
