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Difference between revisions of "TSS:Hg 102163.1"

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Line 4: Line 4:
 
|USH2D=
 
|USH2D=
 
|WI=
 
|WI=
|all_trans=AK022854:101 ENST00000674048.1:-372 NM_001346890:-469
+
|all_trans=HGNC:16361
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
Line 26: Line 26:
 
|nearest_refseq=NM_015404
 
|nearest_refseq=NM_015404
 
|nearest_unigene=Hs.93836
 
|nearest_unigene=Hs.93836
|num_trans=3
+
|num_trans=25861
 
|species=human
 
|species=human
 
|start=114425659
 
|start=114425659

Latest revision as of 18:21, 19 July 2021

Basic information about the TSS


TSS ID:hg_102163.1
Species:human
Chr:chr9
TSS Classification:yes
Start:114425659
End:114425699
Strand:-
TSS Score:1
Start of the center position in the TSS region:114425679
End of the center position in the TSS region:114425680



Gene and protein annotation


Transcript_name:AK022854
Distance:101
GeneID:25861
HGNC/MGI_ID:HGNC:16361
UniProt_ID:
Gene_name:whirlin
Gene_symbol:WHRN
Gene_synonyms:CIP98 PDZD7B USH2D
Gene_source:HGNC:16361



Transcript annotation


Transcript_name:AK022854
Distance:101
Num_trans:25861
All_trans:HGNC:16361



TATA-Box annotation


Distance to TSS:489
Nearest PromoterID:NM_001346890
Entrez ID:25861
Nearest Unigene:Hs.93836
Nearest Refseq:NM_015404
Nearest Ensembl:ENSG00000095397
Gene Name:whirlin
Gene Alias:CIP98|DFNB31|PDZD7B|USH2D|WI
Gene Description:whirlin
Gene Type:protein-coding
CpG%:0
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):