Difference between revisions of "TSS:Hg 10219.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NR_104622:0 NR_104623:22 | + | |all_trans=NR_104622:0 ENST00000641507.1:22 NR_104623:22 ENST00000641325.1:-75 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2606 |
|gene_id=100506022 | |gene_id=100506022 | ||
| − | |gene_name= | + | |gene_name=long intergenic non-protein coding RNA 2606 |
| − | |gene_source= | + | |gene_source=HGNC:54047 |
| − | |gene_symbol= | + | |gene_symbol=LINC02606 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:54047 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284693 |
|nearest_promoter_id=NR_104622 | |nearest_promoter_id=NR_104622 | ||
|nearest_refseq=NR_104622 | |nearest_refseq=NR_104622 | ||
|nearest_unigene=Hs.131775 | |nearest_unigene=Hs.131775 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=9428937 | |start=9428937 | ||
|start_of_center_position=9428968 | |start_of_center_position=9428968 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NR_104622 | + | |transcript_name=NR_104622.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10219.1 | |tss_id=hg_10219.1 | ||
Latest revision as of 18:21, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9428968 |
|---|---|
| End of the center position in the TSS region: | 9428969 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_104622.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NR_104622:0 ENST00000641507.1:22 NR_104623:22 ENST00000641325.1:-75 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NR_104622 |
| Entrez ID: | 100506022 |
| Nearest Unigene: | Hs.131775 |
| Nearest Refseq: | NR_104622 |
| Nearest Ensembl: | ENSG00000284693 |
| Gene Name: | long intergenic non-protein coding RNA 2606 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2606 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
