Difference between revisions of "TSS:Hg 102249.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00156= | ||
| + | |PAPPA-AS= | ||
| + | |PAPPAAS= | ||
| + | |PAPPAS= | ||
| + | |TAF2C2= | ||
| + | |TAF4B= | ||
| + | |TAFII105= | ||
| + | |all_trans=HGNC:35160 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=111844 | |distance_to_tss=111844 | ||
| + | |end=116288775 | ||
| + | |end_of_center_position=116288763 | ||
|entrez_id=493913 | |entrez_id=493913 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=DIPAS | + | |gene_alias=DIPAS{{!}}NCRNA00156{{!}}PAPPA-AS{{!}}PAPPAAS{{!}}PAPPAS{{!}}TAF2C2{{!}}TAF4B{{!}}TAFII105 |
|gene_description=PAPPA antisense RNA 1 | |gene_description=PAPPA antisense RNA 1 | ||
| − | |gene_name=PAPPA- | + | |gene_id=103611155 |
| + | |gene_name=PAPPA antisense RNA 2 | ||
| + | |gene_source=HGNC:35160 | ||
| + | |gene_symbol=PAPPA-AS2 | ||
| + | |gene_synonyms=AGU1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:35160 | ||
|nearest_ensembl=ENSG00000256040 | |nearest_ensembl=ENSG00000256040 | ||
|nearest_promoter_id=NR_103711 | |nearest_promoter_id=NR_103711 | ||
|nearest_refseq=NR_103711 | |nearest_refseq=NR_103711 | ||
|nearest_unigene=Hs.728832 | |nearest_unigene=Hs.728832 | ||
| + | |num_trans=103611155 | ||
| + | |species=human | ||
| + | |start=116288749 | ||
| + | |start_of_center_position=116288762 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000438048.1 AK092105 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102249.1 | |tss_id=hg_102249.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 116288762 |
|---|---|
| End of the center position in the TSS region: | 116288763 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000438048.1 AK092105 |
|---|---|
| Distance: | 0 |
| Num_trans: | 103611155 |
| All_trans: | HGNC:35160 |
TATA-Box annotation
| Distance to TSS: | 111844 |
|---|---|
| Nearest PromoterID: | NR_103711 |
| Entrez ID: | 493913 |
| Nearest Unigene: | Hs.728832 |
| Nearest Refseq: | NR_103711 |
| Nearest Ensembl: | ENSG00000256040 |
| Gene Name: | PAPPA antisense RNA 2 |
| Gene Alias: | DIPAS|NCRNA00156|PAPPA-AS|PAPPAAS|PAPPAS|TAF2C2|TAF4B|TAFII105 |
| Gene Description: | PAPPA antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
