Difference between revisions of "TSS:Hg 102256.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:17021 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance_to_tss= | + | |distance=26 |
| + | |distance_to_tss=88 | ||
| + | |end=117414973 | ||
| + | |end_of_center_position=117414970 | ||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=bA67K19.1 | |gene_alias=bA67K19.1 | ||
|gene_description=astrotactin 2 | |gene_description=astrotactin 2 | ||
| − | |gene_name=ASTN2 | + | |gene_id=23245 |
| + | |gene_name=astrotactin 2 | ||
| + | |gene_source=HGNC:17021 | ||
| + | |gene_symbol=ASTN2 | ||
| + | |gene_synonyms=KIAA0634 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17021 | ||
|nearest_ensembl=ENSG00000148219 | |nearest_ensembl=ENSG00000148219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001365069 |
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
| + | |num_trans=23245 | ||
| + | |species=human | ||
| + | |start=117414965 | ||
| + | |start_of_center_position=117414969 | ||
| + | |strand=- | ||
| + | |transcript_name=AB383928 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102256.1 | |tss_id=hg_102256.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117414969 |
|---|---|
| End of the center position in the TSS region: | 117414970 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB383928 |
|---|---|
| Distance: | 26 |
| Num_trans: | 23245 |
| All_trans: | HGNC:17021 |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_001365069 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | astrotactin 2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
