Difference between revisions of "TSS:Hg 102270.1"
From referenceTSS
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|DBCCR1= | |DBCCR1= | ||
|FAM5A= | |FAM5A= | ||
| − | |all_trans= | + | |all_trans=HGNC:2687 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-7 |
|end=119369465 | |end=119369465 | ||
|end_of_center_position=119369442 | |end_of_center_position=119369442 | ||
|entrez_id=1620 | |entrez_id=1620 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=DBC1 | + | |gene_alias=DBC1{{!}}DBCCR1{{!}}FAM5A |
|gene_description=BMP/retinoic acid inducible neural specific 1 | |gene_description=BMP/retinoic acid inducible neural specific 1 | ||
|gene_id=1620 | |gene_id=1620 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_014618 | |nearest_refseq=NM_014618 | ||
|nearest_unigene=Hs.532316 | |nearest_unigene=Hs.532316 | ||
| − | |num_trans= | + | |num_trans=1620 |
|species=human | |species=human | ||
|start=119369418 | |start=119369418 | ||
|start_of_center_position=119369441 | |start_of_center_position=119369441 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373964.2 | + | |transcript_name=ENST00000265922.8 ENST00000373964.2 AF027734 AK293649 BC021560 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102270.1 | |tss_id=hg_102270.1 | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 119369441 |
|---|---|
| End of the center position in the TSS region: | 119369442 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000265922.8 ENST00000373964.2 AF027734 AK293649 BC021560 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1620 |
| All_trans: | HGNC:2687 |
TATA-Box annotation
| Distance to TSS: | -7 |
|---|---|
| Nearest PromoterID: | NM_014618 |
| Entrez ID: | 1620 |
| Nearest Unigene: | Hs.532316 |
| Nearest Refseq: | NM_014618 |
| Nearest Ensembl: | ENSG00000078725 |
| Gene Name: | BMP/retinoic acid inducible neural specific 1 |
| Gene Alias: | DBC1|DBCCR1|FAM5A |
| Gene Description: | BMP/retinoic acid inducible neural specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
