Difference between revisions of "TSS:Hg 102271.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|DBCCR1= | |DBCCR1= | ||
|FAM5A= | |FAM5A= | ||
| − | |all_trans= | + | |all_trans=HGNC:2687 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance= | + | |distance=42 |
| − | |distance_to_tss=- | + | |distance_to_tss=-48 |
|end=119369490 | |end=119369490 | ||
| + | |end_of_center_position=119369484 | ||
|entrez_id=1620 | |entrez_id=1620 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=DBC1 | + | |gene_alias=DBC1{{!}}DBCCR1{{!}}FAM5A |
|gene_description=BMP/retinoic acid inducible neural specific 1 | |gene_description=BMP/retinoic acid inducible neural specific 1 | ||
|gene_id=1620 | |gene_id=1620 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_014618 | |nearest_refseq=NM_014618 | ||
|nearest_unigene=Hs.532316 | |nearest_unigene=Hs.532316 | ||
| − | |num_trans= | + | |num_trans=1620 |
|species=human | |species=human | ||
|start=119369476 | |start=119369476 | ||
| + | |start_of_center_position=119369483 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000265922. | + | |transcript_name=ENST00000265922.8 AK293649 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102271.1 | |tss_id=hg_102271.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=O60477 | + | |uniprot_id=B4DEJ0 O60477 |
}} | }} | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119369483 |
|---|---|
| End of the center position in the TSS region: | 119369484 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000265922.8 AK293649 |
|---|---|
| Distance: | 42 |
| Num_trans: | 1620 |
| All_trans: | HGNC:2687 |
TATA-Box annotation
| Distance to TSS: | -48 |
|---|---|
| Nearest PromoterID: | NM_014618 |
| Entrez ID: | 1620 |
| Nearest Unigene: | Hs.532316 |
| Nearest Refseq: | NM_014618 |
| Nearest Ensembl: | ENSG00000078725 |
| Gene Name: | BMP/retinoic acid inducible neural specific 1 |
| Gene Alias: | DBC1|DBCCR1|FAM5A |
| Gene Description: | BMP/retinoic acid inducible neural specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
