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Difference between revisions of "TSS:Hg 10229.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000415330.2:0 NR_126367:0 NR_126366:0 NR_126368:0 uc057caz.1:0 BC038541:0 BC071786:0
+
|all_trans=HGNC:51334
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NR_126366
 
|nearest_refseq=NR_126366
 
|nearest_unigene=Hs.661762
 
|nearest_unigene=Hs.661762
|num_trans=7
+
|num_trans=101929074
 
|species=human
 
|species=human
 
|start=9687554
 
|start=9687554
 
|start_of_center_position=9687571
 
|start_of_center_position=9687571
 
|strand=-
 
|strand=-
|transcript_name=ENST00000415330.2 NR_126367 NR_126366 NR_126368 uc057caz.1 BC038541 BC071786
+
|transcript_name=ENST00000415330.2 BC038541
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_10229.1
 
|tss_id=hg_10229.1

Latest revision as of 18:24, 19 July 2021

Basic information about the TSS


TSS ID:hg_10229.1
Species:human
Chr:chr1
TSS Classification:yes
Start:9687554
End:9687588
Strand:-
TSS Score:1
Start of the center position in the TSS region:9687571
End of the center position in the TSS region:9687572



Gene and protein annotation


Transcript_name:ENST00000415330.2 BC038541
Distance:0
GeneID:101929074
HGNC/MGI_ID:HGNC:51334
UniProt_ID:
Gene_name:PIK3CD antisense RNA 2
Gene_symbol:PIK3CD-AS2
Gene_synonyms:
Gene_source:HGNC:51334



Transcript annotation


Transcript_name:ENST00000415330.2 BC038541
Distance:0
Num_trans:101929074
All_trans:HGNC:51334



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NR_126366
Entrez ID:101929074
Nearest Unigene:Hs.661762
Nearest Refseq:NR_126366
Nearest Ensembl:ENSG00000231789
Gene Name:PIK3CD antisense RNA 2
Gene Alias:-
Gene Description:PIK3CD antisense RNA 2
Gene Type:ncRNA
CpG%:0.075
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):