Difference between revisions of "TSS:Hg 102300.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:3234 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance_to_tss= | + | |distance=-39 |
| + | |distance_to_tss=59 | ||
| + | |end=120714420 | ||
| + | |end_of_center_position=120714412 | ||
|entrez_id=1955 | |entrez_id=1955 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=EGFL5 | |gene_alias=EGFL5 | ||
|gene_description=multiple EGF like domains 9 | |gene_description=multiple EGF like domains 9 | ||
| − | |gene_name=MEGF9 | + | |gene_id=1955 |
| + | |gene_name=multiple EGF like domains 9 | ||
| + | |gene_source=HGNC:3234 | ||
| + | |gene_symbol=MEGF9 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3234 | ||
|nearest_ensembl=ENSG00000106780 | |nearest_ensembl=ENSG00000106780 | ||
|nearest_promoter_id=NM_001080497 | |nearest_promoter_id=NM_001080497 | ||
|nearest_refseq=NM_001080497 | |nearest_refseq=NM_001080497 | ||
|nearest_unigene=Hs.744903 | |nearest_unigene=Hs.744903 | ||
| + | |num_trans=1955 | ||
| + | |species=human | ||
| + | |start=120714402 | ||
| + | |start_of_center_position=120714411 | ||
| + | |strand=- | ||
| + | |transcript_name=AY358370 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102300.1 | |tss_id=hg_102300.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:24, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120714411 |
|---|---|
| End of the center position in the TSS region: | 120714412 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY358370 |
|---|---|
| Distance: | -39 |
| Num_trans: | 1955 |
| All_trans: | HGNC:3234 |
TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NM_001080497 |
| Entrez ID: | 1955 |
| Nearest Unigene: | Hs.744903 |
| Nearest Refseq: | NM_001080497 |
| Nearest Ensembl: | ENSG00000106780 |
| Gene Name: | multiple EGF like domains 9 |
| Gene Alias: | EGFL5 |
| Gene Description: | multiple EGF like domains 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
