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Difference between revisions of "TSS:Hg 102341.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|RAB-14=
 
|RAB-14=
|all_trans=AF152463:-51 AF498949:-51 AY553875:-51 CR457394:-51 KJ898922:-52 CU675229:-52 AB528836:-53 AM393292:-55 AM393350:-55 AF203689:-57
+
|all_trans=HGNC:16524
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=-51
 
|distance=-51
|distance_to_tss=8728
+
|distance_to_tss=-8124
 
|end=121193361
 
|end=121193361
 
|end_of_center_position=121193360
 
|end_of_center_position=121193360
|entrez_id=51552
+
|entrez_id=2934
 
|gc_percent=0.308458
 
|gc_percent=0.308458
|gene_alias=FBP
+
|gene_alias=ADF{{!}}AGEL
|gene_description="RAB14, member RAS oncogene family"
+
|gene_description=gelsolin
 
|gene_id=51552
 
|gene_id=51552
|gene_name="RAB14, member RAS oncogene family"
+
|gene_name=RAB14, member RAS oncogene family
 
|gene_source=HGNC:16524
 
|gene_source=HGNC:16524
 
|gene_symbol=RAB14
 
|gene_symbol=RAB14
Line 19: Line 19:
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:16524
 
|hgnc_mgi_id=HGNC:16524
|nearest_ensembl=ENSG00000119396
+
|nearest_ensembl=ENSG00000148180
|nearest_promoter_id=NM_016322
+
|nearest_promoter_id=NM_001353053
|nearest_refseq=NM_016322
+
|nearest_refseq=NM_000177
|nearest_unigene=Hs.371563
+
|nearest_unigene=Hs.522373
|num_trans=10
+
|num_trans=51552
 
|species=human
 
|species=human
 
|start=121193357
 
|start=121193357

Latest revision as of 18:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_102341.1
Species:human
Chr:chr9
TSS Classification:no
Start:121193357
End:121193361
Strand:-
TSS Score:1
Start of the center position in the TSS region:121193359
End of the center position in the TSS region:121193360



Gene and protein annotation


Transcript_name:AF152463 AF498949 AY553875 CR457394
Distance:-51
GeneID:51552
HGNC/MGI_ID:HGNC:16524
UniProt_ID:
Gene_name:RAB14, member RAS oncogene family
Gene_symbol:RAB14
Gene_synonyms:FBP RAB-14
Gene_source:HGNC:16524



Transcript annotation


Transcript_name:AF152463 AF498949 AY553875 CR457394
Distance:-51
Num_trans:51552
All_trans:HGNC:16524



TATA-Box annotation


Distance to TSS:-8124
Nearest PromoterID:NM_001353053
Entrez ID:2934
Nearest Unigene:Hs.522373
Nearest Refseq:NM_000177
Nearest Ensembl:ENSG00000148180
Gene Name:RAB14, member RAS oncogene family
Gene Alias:ADF|AGEL
Gene Description:gelsolin
Gene Type:protein-coding
CpG%:0
GC%:0.308458
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):