Difference between revisions of "TSS:Hg 102365.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=48 |entrez_id=2681 |gc_percent=0.661692 |gene_alias=GGTA|GGTA1|GLYT2|a1/3GTP |gene_description="glycoprotein, alpha-galactosylt...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GGTA1= | ||
| + | |GLYT2= | ||
| + | |a1/3GTP= | ||
| + | |all_trans=HGNC:4253 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=109 | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
| + | |end=121499984 | ||
| + | |end_of_center_position=121499979 | ||
|entrez_id=2681 | |entrez_id=2681 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=GGTA | + | |gene_alias=GGTA{{!}}GGTA1{{!}}GLYT2{{!}}a1/3GTP |
| − | |gene_description= | + | |gene_description=glycoprotein alpha-galactosyltransferase 1, pseudogene |
| − | |gene_name= | + | |gene_id=2681 |
| + | |gene_name=glycoprotein alpha-galactosyltransferase 1 (inactive) | ||
| + | |gene_source=HGNC:4253 | ||
| + | |gene_symbol=GGTA1 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:4253 | ||
|nearest_ensembl=ENSG00000204136 | |nearest_ensembl=ENSG00000204136 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_003191 |
|nearest_refseq=NR_003191 | |nearest_refseq=NR_003191 | ||
|nearest_unigene=Hs.97469 | |nearest_unigene=Hs.97469 | ||
| + | |num_trans=2681 | ||
| + | |species=human | ||
| + | |start=121499973 | ||
| + | |start_of_center_position=121499978 | ||
| + | |strand=- | ||
| + | |transcript_name=BC045756 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102365.1 | |tss_id=hg_102365.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:25, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121499978 |
|---|---|
| End of the center position in the TSS region: | 121499979 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC045756 |
|---|---|
| Distance: | 109 |
| Num_trans: | 2681 |
| All_trans: | HGNC:4253 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NR_003191 |
| Entrez ID: | 2681 |
| Nearest Unigene: | Hs.97469 |
| Nearest Refseq: | NR_003191 |
| Nearest Ensembl: | ENSG00000204136 |
| Gene Name: | glycoprotein alpha-galactosyltransferase 1 (inactive) |
| Gene Alias: | GGTA|GGTA1|GLYT2|a1/3GTP |
| Gene Description: | glycoprotein alpha-galactosyltransferase 1, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.075 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
