Difference between revisions of "TSS:Hg 102376.1"
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000411790 | + | |all_trans=ENST00000411790.1:25 BC039180:25 |
|bA244O19.1= | |bA244O19.1= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=12 |
|distance_to_tss=129833 | |distance_to_tss=129833 | ||
|end=121963803 | |end=121963803 | ||
| + | |end_of_center_position=121963774 | ||
|entrez_id=158135 | |entrez_id=158135 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=C9orf20 | + | |gene_alias=C9orf20{{!}}bA244O19.1 |
|gene_description=tubulin tyrosine ligase like 11 | |gene_description=tubulin tyrosine ligase like 11 | ||
| − | |gene_id= | + | |gene_id=158135 |
| − | |gene_name= | + | |gene_name=tubulin tyrosine ligase like 11 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:18113 |
| − | |gene_symbol=TTLL11 | + | |gene_symbol=TTLL11 |
| − | |gene_synonyms= | + | |gene_synonyms=bA244O19.1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:18113 |
|nearest_ensembl=ENSG00000175764 | |nearest_ensembl=ENSG00000175764 | ||
|nearest_promoter_id=NM_001139442 | |nearest_promoter_id=NM_001139442 | ||
|nearest_refseq=NM_194252 | |nearest_refseq=NM_194252 | ||
|nearest_unigene=Hs.438937 | |nearest_unigene=Hs.438937 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=121963743 | |start=121963743 | ||
| + | |start_of_center_position=121963773 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001386833.1 NM_001386832.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102376.1 | |tss_id=hg_102376.1 | ||
Latest revision as of 18:25, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 121963773 |
|---|---|
| End of the center position in the TSS region: | 121963774 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001386833.1 NM_001386832.1 |
|---|---|
| Distance: | 12 |
| Num_trans: | 2 |
| All_trans: | ENST00000411790.1:25 BC039180:25 |
TATA-Box annotation
| Distance to TSS: | 129833 |
|---|---|
| Nearest PromoterID: | NM_001139442 |
| Entrez ID: | 158135 |
| Nearest Unigene: | Hs.438937 |
| Nearest Refseq: | NM_194252 |
| Nearest Ensembl: | ENSG00000175764 |
| Gene Name: | tubulin tyrosine ligase like 11 |
| Gene Alias: | C9orf20|bA244O19.1 |
| Gene Description: | tubulin tyrosine ligase like 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
