Difference between revisions of "TSS:Hg 102382.1"
From referenceTSS
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|CI-PGIV= | |CI-PGIV= | ||
|PGIV= | |PGIV= | ||
| − | |all_trans= | + | |all_trans=HGNC:7692 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=122159795 | |end=122159795 | ||
|end_of_center_position=122159769 | |end_of_center_position=122159769 | ||
|entrez_id=4702 | |entrez_id=4702 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=CI-19KD | + | |gene_alias=CI-19KD{{!}}CI-PGIV{{!}}PGIV |
|gene_description=NADH:ubiquinone oxidoreductase subunit A8 | |gene_description=NADH:ubiquinone oxidoreductase subunit A8 | ||
|gene_id=4702 | |gene_id=4702 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:7692 | |hgnc_mgi_id=HGNC:7692 | ||
|nearest_ensembl=ENSG00000119421 | |nearest_ensembl=ENSG00000119421 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318195 |
|nearest_refseq=NM_014222 | |nearest_refseq=NM_014222 | ||
|nearest_unigene=Hs.495039 | |nearest_unigene=Hs.495039 | ||
| − | |num_trans= | + | |num_trans=4702 |
|species=human | |species=human | ||
|start=122159742 | |start=122159742 | ||
|start_of_center_position=122159768 | |start_of_center_position=122159768 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK301520 AF044953 AK314135 | + | |transcript_name=ENST00000373768.4 AK301520 AF044953 AK314135 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102382.1 | |tss_id=hg_102382.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B7Z768 | + | |uniprot_id=B7Z768 P51970 |
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 122159768 |
|---|---|
| End of the center position in the TSS region: | 122159769 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373768.4 AK301520 AF044953 AK314135 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4702 |
| All_trans: | HGNC:7692 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001318195 |
| Entrez ID: | 4702 |
| Nearest Unigene: | Hs.495039 |
| Nearest Refseq: | NM_014222 |
| Nearest Ensembl: | ENSG00000119421 |
| Gene Name: | NADH:ubiquinone oxidoreductase subunit A8 |
| Gene Alias: | CI-19KD|CI-PGIV|PGIV |
| Gene Description: | NADH:ubiquinone oxidoreductase subunit A8 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
