Difference between revisions of "TSS:Hg 10239.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17447 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=10 | |distance=10 | ||
| − | |distance_to_tss= | + | |distance_to_tss=60128 |
|end=9751599 | |end=9751599 | ||
|end_of_center_position=9751595 | |end_of_center_position=9751595 | ||
| − | |entrez_id= | + | |entrez_id=5293 |
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias= | + | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D |
| − | |gene_description= | + | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
|gene_id=22883 | |gene_id=22883 | ||
|gene_name=calsyntenin 1 | |gene_name=calsyntenin 1 | ||
| Line 16: | Line 16: | ||
|gene_symbol=CLSTN1 | |gene_symbol=CLSTN1 | ||
|gene_synonyms=CDHR12 CSTN1 KIAA0911 | |gene_synonyms=CDHR12 CSTN1 KIAA0911 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:17447 | |hgnc_mgi_id=HGNC:17447 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000171608 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350235 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_005026 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.518451 |
| − | |num_trans= | + | |num_trans=22883 |
|species=human | |species=human | ||
|start=9751590 | |start=9751590 | ||
|start_of_center_position=9751594 | |start_of_center_position=9751594 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000435891.5 | + | |transcript_name=ENST00000435891.5 AK000605 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10239.1 | |tss_id=hg_10239.1 | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9751594 |
|---|---|
| End of the center position in the TSS region: | 9751595 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000435891.5 AK000605 |
|---|---|
| Distance: | 10 |
| Num_trans: | 22883 |
| All_trans: | HGNC:17447 |
TATA-Box annotation
| Distance to TSS: | 60128 |
|---|---|
| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | calsyntenin 1 |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
