Difference between revisions of "TSS:Hg 102397.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=129 |entrez_id=5082 |gc_percent=0.641791 |gene_alias=PhLP |gene_description=phosducin like |gene_name=PDCL |gene_type=protein-co...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:8770 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=61 | ||
| + | |end=122828532 | ||
| + | |end_of_center_position=122828527 | ||
|entrez_id=5082 | |entrez_id=5082 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=PhLP | |gene_alias=PhLP | ||
|gene_description=phosducin like | |gene_description=phosducin like | ||
| − | |gene_name=PDCL | + | |gene_id=5082 |
| + | |gene_name=phosducin like | ||
| + | |gene_source=HGNC:8770 | ||
| + | |gene_symbol=PDCL | ||
| + | |gene_synonyms=DKFZp564M1863 PhLP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8770 | ||
|nearest_ensembl=ENSG00000136940 | |nearest_ensembl=ENSG00000136940 | ||
|nearest_promoter_id=NM_005388 | |nearest_promoter_id=NM_005388 | ||
|nearest_refseq=NM_005388 | |nearest_refseq=NM_005388 | ||
|nearest_unigene=Hs.271749 | |nearest_unigene=Hs.271749 | ||
| + | |num_trans=5082 | ||
| + | |species=human | ||
| + | |start=122828521 | ||
| + | |start_of_center_position=122828526 | ||
| + | |strand=- | ||
| + | |transcript_name=BC017227 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102397.1 | |tss_id=hg_102397.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122828526 |
|---|---|
| End of the center position in the TSS region: | 122828527 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC017227 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5082 |
| All_trans: | HGNC:8770 |
TATA-Box annotation
| Distance to TSS: | 61 |
|---|---|
| Nearest PromoterID: | NM_005388 |
| Entrez ID: | 5082 |
| Nearest Unigene: | Hs.271749 |
| Nearest Refseq: | NM_005388 |
| Nearest Ensembl: | ENSG00000136940 |
| Gene Name: | phosducin like |
| Gene Alias: | PhLP |
| Gene Description: | phosducin like |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
