Difference between revisions of "TSS:Hg 10240.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:17447 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance_to_tss= | + | |distance=39 |
| − | |entrez_id= | + | |distance_to_tss=60158 |
| + | |end=9751630 | ||
| + | |end_of_center_position=9751625 | ||
| + | |entrez_id=5293 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=- | + | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D |
| − | | | + | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| − | |gene_name= | + | |gene_id=22883 |
| − | | | + | |gene_name=calsyntenin 1 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:17447 |
| − | |nearest_promoter_id= | + | |gene_symbol=CLSTN1 |
| − | |nearest_refseq= | + | |gene_synonyms=CDHR12 CSTN1 KIAA0911 |
| − | |nearest_unigene=Hs. | + | |gene_type=protein-coding |
| + | |hgnc_mgi_id=HGNC:17447 | ||
| + | |nearest_ensembl=ENSG00000171608 | ||
| + | |nearest_promoter_id=NM_001350235 | ||
| + | |nearest_refseq=NM_005026 | ||
| + | |nearest_unigene=Hs.518451 | ||
| + | |num_trans=22883 | ||
| + | |species=human | ||
| + | |start=9751619 | ||
| + | |start_of_center_position=9751624 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000435891.5 AK000605 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10240.1 | |tss_id=hg_10240.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SR54 | ||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9751624 |
|---|---|
| End of the center position in the TSS region: | 9751625 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000435891.5 AK000605 |
|---|---|
| Distance: | 39 |
| Num_trans: | 22883 |
| All_trans: | HGNC:17447 |
TATA-Box annotation
| Distance to TSS: | 60158 |
|---|---|
| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | calsyntenin 1 |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
