Difference between revisions of "TSS:Hg 102401.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |RNF164= | ||
| + | |all_trans=HGNC:21461 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance_to_tss=- | + | |distance=102 |
| + | |distance_to_tss=-117 | ||
| + | |end=122905491 | ||
| + | |end_of_center_position=122905476 | ||
|entrez_id=54542 | |entrez_id=54542 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=MNAB | + | |gene_alias=MNAB{{!}}RNF164 |
|gene_description=ring finger and CCCH-type domains 2 | |gene_description=ring finger and CCCH-type domains 2 | ||
| − | |gene_name=RC3H2 | + | |gene_id=54542 |
| + | |gene_name=ring finger and CCCH-type domains 2 | ||
| + | |gene_source=HGNC:21461 | ||
| + | |gene_symbol=RC3H2 | ||
| + | |gene_synonyms=FLJ20301 FLJ20713 RNF164 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21461 | ||
|nearest_ensembl=ENSG00000056586 | |nearest_ensembl=ENSG00000056586 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001354478 |
|nearest_refseq=NM_018835 | |nearest_refseq=NM_018835 | ||
|nearest_unigene=Hs.533499 | |nearest_unigene=Hs.533499 | ||
| + | |num_trans=54542 | ||
| + | |species=human | ||
| + | |start=122905460 | ||
| + | |start_of_center_position=122905475 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000357244.7 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102401.1 | |tss_id=hg_102401.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R899 Q9HBD1 | ||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 122905475 |
|---|---|
| End of the center position in the TSS region: | 122905476 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000357244.7 |
|---|---|
| Distance: | 102 |
| Num_trans: | 54542 |
| All_trans: | HGNC:21461 |
TATA-Box annotation
| Distance to TSS: | -117 |
|---|---|
| Nearest PromoterID: | NM_001354478 |
| Entrez ID: | 54542 |
| Nearest Unigene: | Hs.533499 |
| Nearest Refseq: | NM_018835 |
| Nearest Ensembl: | ENSG00000056586 |
| Gene Name: | ring finger and CCCH-type domains 2 |
| Gene Alias: | MNAB|RNF164 |
| Gene Description: | ring finger and CCCH-type domains 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
