Difference between revisions of "TSS:Hg 102420.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| + | |end=124009396 | ||
| + | |end_of_center_position=124009379 | ||
|entrez_id=100505588 | |entrez_id=100505588 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100505588 | |gene_description=uncharacterized LOC100505588 | ||
| − | |gene_name=LOC100505588 | + | |gene_id=100505588 |
| + | |gene_name=uncharacterized LOC100505588 | ||
| + | |gene_source=EntrezGene:100505588 | ||
| + | |gene_symbol=LOC100505588 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000236668 | |nearest_ensembl=ENSG00000236668 | ||
|nearest_promoter_id=NR_135129 | |nearest_promoter_id=NR_135129 | ||
|nearest_refseq=NR_135129 | |nearest_refseq=NR_135129 | ||
|nearest_unigene=Hs.547168 | |nearest_unigene=Hs.547168 | ||
| + | |num_trans=100505588 | ||
| + | |species=human | ||
| + | |start=124009360 | ||
| + | |start_of_center_position=124009378 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000453529.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102420.1 | |tss_id=hg_102420.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 124009378 |
|---|---|
| End of the center position in the TSS region: | 124009379 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000453529.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100505588 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NR_135129 |
| Entrez ID: | 100505588 |
| Nearest Unigene: | Hs.547168 |
| Nearest Refseq: | NR_135129 |
| Nearest Ensembl: | ENSG00000236668 |
| Gene Name: | uncharacterized LOC100505588 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100505588 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
