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Difference between revisions of "TSS:Hg 102428.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000259457.7:0 ENST00000441097.1:0 uc004boj.5:0 uc064vpw.1:0 BC000509:0 GU727627:0 D38048:0 BC008414:0 AK098757:0 AK223356:0 AK223007:0 AK314302:0 KJ897406:0 BT007218:0 AB464089:0 CR456721:0 AK303460:0 U44425:14 NM_002799:-18 AK308756:-18 ENST00000466951.1:118 uc064vpx.1:118 ENST00000498485.5:134 uc064vpt.1:134 BC017116:489
+
|all_trans=HGNC:9544
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.08
 
|cpg_percent=0.08
 
|distance=0
 
|distance=0
|distance_to_tss=33
+
|distance_to_tss=2
 
|end=124415455
 
|end=124415455
 
|end_of_center_position=124415440
 
|end_of_center_position=124415440
Line 12: Line 12:
 
|gene_description=proteasome subunit beta 7
 
|gene_description=proteasome subunit beta 7
 
|gene_id=5695
 
|gene_id=5695
|gene_name=proteasome subunit beta 7
+
|gene_name=proteasome 20S subunit beta 7
 
|gene_source=HGNC:9544
 
|gene_source=HGNC:9544
 
|gene_symbol=PSMB7
 
|gene_symbol=PSMB7
|gene_synonyms=
+
|gene_synonyms=Z
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:9544
 
|hgnc_mgi_id=HGNC:9544
Line 22: Line 22:
 
|nearest_refseq=NM_002799
 
|nearest_refseq=NM_002799
 
|nearest_unigene=Hs.213470
 
|nearest_unigene=Hs.213470
|num_trans=25
+
|num_trans=5695
 
|species=human
 
|species=human
 
|start=124415424
 
|start=124415424
 
|start_of_center_position=124415439
 
|start_of_center_position=124415439
 
|strand=-
 
|strand=-
|transcript_name=ENST00000259457.7 ENST00000441097.1 uc004boj.5 uc064vpw.1 BC000509 GU727627 D38048 BC008414 AK098757 AK223356 AK223007 AK314302 KJ897406 BT007218 AB464089 CR456721 AK303460
+
|transcript_name=ENST00000259457.8 ENST00000441097.1 BC000509 GQ891532 GU727627 D38048 BC008414 AK098757 AK223356 AK223007 AK314302 BT007218 AB464089 CR456721 AK303460
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102428.1
 
|tss_id=hg_102428.1

Latest revision as of 18:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_102428.1
Species:human
Chr:chr9
TSS Classification:yes
Start:124415424
End:124415455
Strand:-
TSS Score:1
Start of the center position in the TSS region:124415439
End of the center position in the TSS region:124415440



Gene and protein annotation


Transcript_name:ENST00000259457.8 ENST00000441097.1 BC000509 GQ891532 GU727627 D38048 BC008414 AK098757 AK223356 AK223007 AK314302 BT007218 AB464089 CR456721 AK303460
Distance:0
GeneID:5695
HGNC/MGI_ID:HGNC:9544
UniProt_ID:B2RAQ9 E9KL30 Q5TBG5 Q86U62 Q99436
Gene_name:proteasome 20S subunit beta 7
Gene_symbol:PSMB7
Gene_synonyms:Z
Gene_source:HGNC:9544



Transcript annotation


Transcript_name:ENST00000259457.8 ENST00000441097.1 BC000509 GQ891532 GU727627 D38048 BC008414 AK098757 AK223356 AK223007 AK314302 BT007218 AB464089 CR456721 AK303460
Distance:0
Num_trans:5695
All_trans:HGNC:9544



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_002799
Entrez ID:5695
Nearest Unigene:Hs.213470
Nearest Refseq:NM_002799
Nearest Ensembl:ENSG00000136930
Gene Name:proteasome 20S subunit beta 7
Gene Alias:Z
Gene Description:proteasome subunit beta 7
Gene Type:protein-coding
CpG%:0.08
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):