Difference between revisions of "TSS:Hg 102433.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ELP= | ||
| + | |FTZ1= | ||
| + | |FTZF1= | ||
| + | |POF7= | ||
| + | |SF-1= | ||
| + | |SF1= | ||
| + | |SPGF8= | ||
| + | |SRXY3= | ||
| + | |all_trans=HGNC:7983 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=-30 |
| + | |distance_to_tss=205 | ||
| + | |end=124507205 | ||
| + | |end_of_center_position=124507195 | ||
|entrez_id=2516 | |entrez_id=2516 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AD4BP | + | |gene_alias=AD4BP{{!}}ELP{{!}}FTZ1{{!}}FTZF1{{!}}POF7{{!}}SF-1{{!}}SF1{{!}}SPGF8{{!}}SRXX4{{!}}SRXY3{{!}}hSF-1 |
|gene_description=nuclear receptor subfamily 5 group A member 1 | |gene_description=nuclear receptor subfamily 5 group A member 1 | ||
| − | |gene_name=NR5A1 | + | |gene_id=2516 |
| + | |gene_name=nuclear receptor subfamily 5 group A member 1 | ||
| + | |gene_source=HGNC:7983 | ||
| + | |gene_symbol=NR5A1 | ||
| + | |gene_synonyms=AD4BP ELP FTZ1 SF-1 SF1 hSF-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSF-1= | ||
| + | |hgnc_mgi_id=HGNC:7983 | ||
|nearest_ensembl=ENSG00000136931 | |nearest_ensembl=ENSG00000136931 | ||
|nearest_promoter_id=NM_004959 | |nearest_promoter_id=NM_004959 | ||
|nearest_refseq=NM_004959 | |nearest_refseq=NM_004959 | ||
|nearest_unigene=Hs.495108 | |nearest_unigene=Hs.495108 | ||
| − | |tata_box= | + | |num_trans=2516 |
| + | |species=human | ||
| + | |start=124507183 | ||
| + | |start_of_center_position=124507194 | ||
| + | |strand=- | ||
| + | |tata_box=-31(CCTCTAATGGCC,+,0.00) | ||
| + | |transcript_name=ENST00000455734.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102433.1 | |tss_id=hg_102433.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T6F6 | ||
}} | }} | ||
Latest revision as of 18:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124507194 |
|---|---|
| End of the center position in the TSS region: | 124507195 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000455734.1 |
|---|---|
| Distance: | -30 |
| Num_trans: | 2516 |
| All_trans: | HGNC:7983 |
TATA-Box annotation
| Distance to TSS: | 205 |
|---|---|
| Nearest PromoterID: | NM_004959 |
| Entrez ID: | 2516 |
| Nearest Unigene: | Hs.495108 |
| Nearest Refseq: | NM_004959 |
| Nearest Ensembl: | ENSG00000136931 |
| Gene Name: | nuclear receptor subfamily 5 group A member 1 |
| Gene Alias: | AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 |
| Gene Description: | nuclear receptor subfamily 5 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -31(CCTCTAATGGCC,+,0.00) |
