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Difference between revisions of "TSS:Hg 102455.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000493018.5:0 uc064vql.1:0 ENST00000487431.1:-1 uc064vqm.1:-1 U12465:2 BC071915:3 BC000348:-10 ENST00000373570.8:15 uc064vqk.1:15 AK291072:-20 BC010919:-22 D28448:-22 ENST00000348462.5:-26 ENST00000629845.1:-26 NM_007209:-26 uc004boy.2:-26 uc064vqn.1:-26 ENST00000495728.1:-46 uc064vqo.1:-46 BC094828:374 CU674168:374 KJ893256:374 KJ898381:374 DQ891363:374 DQ894543:374 CR456877:374
+
|all_trans=HGNC:10344
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.13
 
|cpg_percent=0.13
 
|distance=0
 
|distance=0
|distance_to_tss=29
+
|distance_to_tss=25
 
|end=124861935
 
|end=124861935
 
|end_of_center_position=124861933
 
|end_of_center_position=124861933
 
|entrez_id=11224
 
|entrez_id=11224
 
|gc_percent=0.736318
 
|gc_percent=0.736318
|gene_alias=L35
+
|gene_alias=DBA19{{!}}L35
 
|gene_description=ribosomal protein L35
 
|gene_description=ribosomal protein L35
 
|gene_id=11224
 
|gene_id=11224
Line 22: Line 22:
 
|nearest_refseq=NM_007209
 
|nearest_refseq=NM_007209
 
|nearest_unigene=Hs.182825
 
|nearest_unigene=Hs.182825
|num_trans=26
+
|num_trans=11224
 
|species=human
 
|species=human
 
|start=124861929
 
|start=124861929
 
|start_of_center_position=124861932
 
|start_of_center_position=124861932
 
|strand=-
 
|strand=-
|transcript_name=ENST00000493018.5 uc064vql.1
+
|transcript_name=ENST00000493018.5
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_102455.1
 
|tss_id=hg_102455.1

Latest revision as of 18:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_102455.1
Species:human
Chr:chr9
TSS Classification:yes
Start:124861929
End:124861935
Strand:-
TSS Score:1
Start of the center position in the TSS region:124861932
End of the center position in the TSS region:124861933



Gene and protein annotation


Transcript_name:ENST00000493018.5
Distance:0
GeneID:11224
HGNC/MGI_ID:HGNC:10344
UniProt_ID:F2Z388
Gene_name:ribosomal protein L35
Gene_symbol:RPL35
Gene_synonyms:L35
Gene_source:HGNC:10344



Transcript annotation


Transcript_name:ENST00000493018.5
Distance:0
Num_trans:11224
All_trans:HGNC:10344



TATA-Box annotation


Distance to TSS:25
Nearest PromoterID:NM_007209
Entrez ID:11224
Nearest Unigene:Hs.182825
Nearest Refseq:NM_007209
Nearest Ensembl:ENSG00000136942
Gene Name:ribosomal protein L35
Gene Alias:DBA19|L35
Gene Description:ribosomal protein L35
Gene Type:protein-coding
CpG%:0.13
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):