Difference between revisions of "TSS:Hg 102464.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NET40= | ||
| + | |all_trans=HGNC:26709 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance_to_tss= | + | |distance=11 |
| + | |distance_to_tss=-20 | ||
| + | |end=125143557 | ||
| + | |end_of_center_position=125143548 | ||
|entrez_id=286205 | |entrez_id=286205 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=C9orf126 | + | |gene_alias=C9orf126{{!}}NET40 |
|gene_description=suppressor of cancer cell invasion | |gene_description=suppressor of cancer cell invasion | ||
| − | |gene_name=SCAI | + | |gene_id=286205 |
| + | |gene_name=suppressor of cancer cell invasion | ||
| + | |gene_source=HGNC:26709 | ||
| + | |gene_symbol=SCAI | ||
| + | |gene_synonyms=FLJ36664 NET40 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26709 | ||
|nearest_ensembl=ENSG00000173611 | |nearest_ensembl=ENSG00000173611 | ||
|nearest_promoter_id=NM_173690 | |nearest_promoter_id=NM_173690 | ||
|nearest_refseq=NM_173690 | |nearest_refseq=NM_173690 | ||
|nearest_unigene=Hs.59504 | |nearest_unigene=Hs.59504 | ||
| + | |num_trans=286205 | ||
| + | |species=human | ||
| + | |start=125143538 | ||
| + | |start_of_center_position=125143547 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000336505.11 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102464.1 | |tss_id=hg_102464.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N9R8 | ||
}} | }} | ||
Latest revision as of 18:27, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 125143547 |
|---|---|
| End of the center position in the TSS region: | 125143548 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000336505.11 |
|---|---|
| Distance: | 11 |
| Num_trans: | 286205 |
| All_trans: | HGNC:26709 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_173690 |
| Entrez ID: | 286205 |
| Nearest Unigene: | Hs.59504 |
| Nearest Refseq: | NM_173690 |
| Nearest Ensembl: | ENSG00000173611 |
| Gene Name: | suppressor of cancer cell invasion |
| Gene Alias: | C9orf126|NET40 |
| Gene Description: | suppressor of cancer cell invasion |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
