Difference between revisions of "TSS:Hg 102472.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PP6C= | |PP6C= | ||
| − | |all_trans= | + | |all_trans=HGNC:9323 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
|end=125189923 | |end=125189923 | ||
| + | |end_of_center_position=125189916 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6{{!}}PP6C |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
|gene_id=5537 | |gene_id=5537 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:9323 | |hgnc_mgi_id=HGNC:9323 | ||
|nearest_ensembl=ENSG00000119414 | |nearest_ensembl=ENSG00000119414 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001123369 |
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| − | |num_trans= | + | |num_trans=5537 |
|species=human | |species=human | ||
|start=125189908 | |start=125189908 | ||
| + | |start_of_center_position=125189915 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000415905.5 ENST00000451402.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102472.1 | |tss_id=hg_102472.1 | ||
Latest revision as of 18:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189915 |
|---|---|
| End of the center position in the TSS region: | 125189916 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000415905.5 ENST00000451402.5 |
|---|---|
| Distance: | -16 |
| Num_trans: | 5537 |
| All_trans: | HGNC:9323 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_001123369 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6|PP6C |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
